BP_GENERATE_HISTOGRAM(User Contributed Perl DocumentatBP_GENERATE_HISTOGRAM(1)NAME
generate_histogram.pl -- Generate a histogram of Bio::DB::GFF features
SYNOPSIS
generate_histogram.pl -d gadfly variation gene:curated
DESCRIPTION
Use this utility to generate feature density histograms from
Bio::DB::GFF databases. The result is a GFF data file that is suitable
for loading with load_gff.pl.
OPTIONS
The following options are recognized:
Option Description
-----------------
--dsn <dsn> Data source (default dbi:mysql:test)
--adaptor <adaptor> Schema adaptor (default dbi::mysqlopt)
--user <user> Username for mysql authentication
--pass <password> Password for mysql authentication
--aggregator <list> Comma-separated list of aggregators
BUGS
Please report them.
SEE ALSO
Bio::DB::GFF
AUTHOR
Lincoln Stein <lstein@cshl.org>
Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify it
under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
perl v5.14.1 2011-07-22 BP_GENERATE_HISTOGRAM(1)