gmx-wheel(1) GROMACS Manual gmx-wheel(1)NAMEgmx-wheel - Plot helical wheels
SYNOPSIS
gmx wheel [-f [<.dat>]] [-o [<.eps>]] [-nice <int>] [-r0 <int>]
[-rot0 <real>] [-T <string>] [-[no]nn]
DESCRIPTION
gmx wheel plots a helical wheel representation of your sequence. The
input sequence is in the .dat file where the first line contains the
number of residues and each consecutive line contains a residue name.
OPTIONS
Options to specify input and output files:
-f [<.dat>] (nnnice.dat) (Input)
Generic data file
-o [<.eps>] (plot.eps) (Output)
Encapsulated PostScript (tm) file
Other options:
-nice <int> (19)
Set the nicelevel
-r0 <int> (1)
The first residue number in the sequence
-rot0 <real> (0)
Rotate around an angle initially (90 degrees makes sense)
-T <string>
Plot a title in the center of the wheel (must be shorter than 10
characters, or it will overwrite the wheel)
-[no]nn (yes)
Toggle numbers
SEE ALSOgromacs(7)
More information about GROMACS is available at <http://www.gro‐
macs.org/>.
VERSION 5.0.6gmx-wheel(1)